Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015853714.1_cds_XP_016512338.1_24993
CDS Infomation

[gene=LOC107829383] [db_xref=GeneID:107829383] [protein=DNA-directed RNA polymerase III subunit RPC5-like isoform X2] [protein_id=XP_016512338.1] [location=join(46971..47345,47437..47505,47633..47740,48266..48340,48835..48999,49446..49481,49745..49851,50000..50071,50502..50550,50685..51274,52078..52183)] [gbkey=CDS]
Sequence

ATGGCAGAGATGGATTTGGACTTCGACGGCCCAAGTAAAGCTCCAACTAGGCCATCCCGT
TTTGCTCCCAAAAGCTCTAAATTGAAGCCCCAACCCCAACAAGTAACCAAACCCAAACCT
GAAACACCGTTATCATCTTCTGATCCTCCTATTCCAACTAAAAAGGAAGAATTAGTTTCA
AAACCCTCAGTAAAAGATCATCCAGCCGAAAATGGAGCCGCAATGGTTAAAGATGACGTT
CCATTGGATGAAAACACTACGGGAGACGACGTGGCAGAAGAAGAACAAGTCACCATGGAT
ACTGATAGCGTTGAAGATGAAGTTGTTCGTGAAATTGATGTGTTTTTTACCCCTTCCTCT
GATCCTAACTCTCAGCTATATGTGTTCCAATATCCGTTGAGGTCCGTATGGCGTCCCTAT
GAATTGGAGGAAAGATGTCAAGAGGTGAGATTGAGACCTTCAACTGCACAAATGGAGGTT
GATTTGGCAGTAGATTTTGATTCTAAAAATTTTGACCGAGACTCTGTTCATGCAGTAAAG
ATGGAAAAGCAGACCCTTTCTACATCATGGATGCCATTATCAACTTGCACCTCTGGATAT
GCTGTTGGGGTCCTCATTGGTGATAAGTTGCACCTCAATCCTATTCATGCAGTTGTACAG
CTCCGACCATCACAGCAGCATCTTAAGGAAAGTGAGTTGAAGAAGAAGAACATTGCCACC
GGCAGTGATGGAAAAACTGTTGAAAACAAAGAAGTCGAGGAAAAAAAGCCTGCGGGTCCA
TCAAAGAAGCAGAACAAACCACCTGGGAATGTCAAGGATATTGAAGAGCATTGGGTACAT
CTAAAATACCATGGAGCTAGGAGTGACATTTCAGCCAGATATCTACAGGAAATGGCCATG
GAGGAAGGCTCTCCAGTATCATTTTCAATGAGCCCGATTGATTATCTGAACGCTGTGTGT
CCTGGCAGACCAACTGATACTGACAGATTAAAAATTCTTCGAACAAGGTTGTCTCAATTA
CCTCTTGAAGAACGCATTAGAACTTGGCTTCTTGAGGGGCCTCCAATTCATCGTTTTGAT
GCTCTAAAGCACCTGGCTCTGGATGATCCTGTTGATGAAATTTTGAGAGTCCTCCAAAGA
TACGCACAATTAGTTCAAGGATTATGGGTTCCAAAAAGTTCATTAATCTATGGAAAGAAT
GATGGACTTGAAGTTTTAGCAAGGAATTTTATTCTCTTTGAGTTTAGCAAGAGTACCATT
ATTAAGCAGAAAGTTTTTTCCAGGAGGTTGGATTTCCTTAAAGCTGCGAAACCAACACTA
AAATCATTAGCTGTTGAGAGGCTTGACCTGAATGATTGGAAGCTCAAAGAGCATCCTGAC
AAGAAATTTGAAGTTCTTTATGGTGATGTTGTGAAAGAGCAGCAAGCTACCTGGGAATGC
ATGGGGAAACAGATCAATGGTATTTTGTCCGGAGGAAGAAACAAGCCTCCTATGAAGAAT
TTAAATTCAAATGCCAACATTCCTGCACTTCCAGGTGGCGGTAAACCCGCTCCTGGGTCA
CTTTCGCGAACATCTATGTCAGAAAAGACTCGAGAAGCTTTACCAAAGGCGCTTCAAAAA
GTTTTTAGAATCTATAAGGCTTGCAGATCGGAAATCCATTGTTTAATTTTGCCAGTTTCC
AGCAAATCCGCCAACGTCTGCGAGATGTGGCAGTTTCTGAGTCTCAAAAGGGAGATGCAA
AGAAGGCCATAA

Peptide Sequence

PEP ID

XP_016512338.1
PEP Infomation

PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform X2 [Nicotiana tabacum]
Sequence

MAEMDLDFDGPSKAPTRPSRFAPKSSKLKPQPQQVTKPKPETPLSSSDPPIPTKKEELVS
KPSVKDHPAENGAAMVKDDVPLDENTTGDDVAEEEQVTMDTDSVEDEVVREIDVFFTPSS
DPNSQLYVFQYPLRSVWRPYELEERCQEVRLRPSTAQMEVDLAVDFDSKNFDRDSVHAVK
MEKQTLSTSWMPLSTCTSGYAVGVLIGDKLHLNPIHAVVQLRPSQQHLKESELKKKNIAT
GSDGKTVENKEVEEKKPAGPSKKQNKPPGNVKDIEEHWVHLKYHGARSDISARYLQEMAM
EEGSPVSFSMSPIDYLNAVCPGRPTDTDRLKILRTRLSQLPLEERIRTWLLEGPPIHRFD
ALKHLALDDPVDEILRVLQRYAQLVQGLWVPKSSLIYGKNDGLEVLARNFILFEFSKSTI
IKQKVFSRRLDFLKAAKPTLKSLAVERLDLNDWKLKEHPDKKFEVLYGDVVKEQQATWEC
MGKQINGILSGGRNKPPMKNLNSNANIPALPGGGKPAPGSLSRTSMSEKTREALPKALQK
VFRIYKACRSEIHCLILPVSSKSANVCEMWQFLSLKREMQRRP

Transcript Sequence

Gene sequence data has not been registered.